Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTGRCPTVAVVGAGMSGMCVAITLLSAGITDVCIYEKADDVGGTWRDNTYPGLTCDVPSRLYQYSFA----KNPNWTQMFSRGGEIQDYLRGIAERYGLRHRIRFGATVVSARFDDG--RWVLRTDSGTESTVDFLISATGVLHHPRIPPIAGLDDFRGTVFHSARWDHT-VPLLGRRIAVIGTGSTGVQLVCGLAGVAGKVTMFQRTAQWVLPWPN---------PRYSKLARVF--------HRAFP------------CLGSLAYKAYSLSF-ETFAVALSNPGLHRKLVGAVCRASLRR-VRDPRLRRALTP-DYEPMCKRLVMSGGFYRAIQRDDVELV---TAGIDHVEHRGIVTDDGVLHEVDVIVLATGFDSH-AFFRPMQLTGRDGIRIDDVWQDGPHAHQTVAIPGFPNFFMMLGPHSP--VGNFPLTAVAESQ--AEHIVQWIKRWRHGEFDTMEPKSAATEAYNTVLRAAMPNTVWTTGCDSWYL--NKDGIPEVW-PFAPAKHRAMLANLHPEEYDLRRYAAVRATSRPQSA |
| 4AP3 Chain:A ((24-522)) | -------VVVVGAGIAGLYAIHRFRSQGLT-VRAFEAASGVGGVWYWNRYPGARCDVESIDYSYSFSPELEQEWNWSEKYATQPEILAYLEHVADRFDLRRDIRFDTRVTSAVLDEEGLRWTVRTDRGDEVSARFLVVAAGPLSNANTPAFDGLDRFTGDIVHTARWPHDGVDFTGKRVGVIGTGSSGIQSIPIIAEQAEQLFVFQRSANYSIPAG-DDATRAEQKANYAERRRLSRESGGGSPHRPHPKSALEVSEEERRAVYEERWKLGGVLFSKAFPDQLTDPAAN-DTARAFWEEKIRAVVDDPAVAELLTPKDHAIGAKRIVLDSGYYETYNRDNVELVDLRSTPIVGMDETGIVT-TGAHYDLDMIVLATGFDAMTGSLDKLEIVGRGGRTLKETWAAGPRTYLGLGIDGFPNFFNLTGPGSPSVLANMVLHSELHVDWVADAIAYLDARGAAGIEGTPEAVADWVEECRNRAEASLLNS-----ANSWYLGAN-----RVFMPF---------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4AP3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -338924 for 3577 contacts (-94.8/contact) +
2D Compatibility (PS) -46674 + (NN) -16494 + (LL) 2848
1D Compatibility (HY) -25600 + (ID) 8400
Total energy: -433244.0 ( -121.12 by residue)
QMean score : 0.501
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