Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSKELTAKKRAALNRLKTVRGHLDGIVRMLESDAYCV--DVMKQISAVQSSLERANRVMLHNHLETCFSTAVLDGHGQAAIEELIDAVKFTPALTGPHARLGGAAVGESATEEPMPDASNM
4IQK Chain:A ((156-239))
----------AVLNRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVLHNCI---YAAGGYDGQDQLNSVERYDVATATWTFVAP------------------------
General information:
TITO was launched using:
RESULT:
Template:
4IQK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -13335 for 561 contacts (-23.8/contact) +
2D Compatibility (PS) -8311 + (NN) 5295 + (LL) 2164
1D Compatibility (HY) -2000 + (ID) 1150
Total energy: -17337.0 ( -30.90 by residue)
QMean score : -0.039
(partial model without unconserved sides chains):
PDB file :
Tito_4IQK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4IQK-query.scw
PDB file :
Tito_Scwrl_4IQK.pdb
: