Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTYETILVERDQRVGIITLNRPQALNALNSQVMNEVTSAATELDDDPDIGAIIITGSAKAFAAGADIKEMADLTFADAFTADFFATWGKLAAVRTPTIAAVAGYALGGGCELAMMCDVLIAADTAKFGQPEIKLGVLPGMGGSQRLTRAIGKAKAMDLILTGRTMDAAEAERSGLVSRVVPADDLLTEARATATTISQMSASAARMAKEAVNRAFESSLSEGLLYERRLFHSAFATEDQSEGMAAFIEKRAPQFTHR
4FJW Chain:D ((1-256))
MTYETILVERDQRVGIITLNRPQALNALNSQVMNEVTSAATELDDDPDIGAIIITGSAKAFAAGADIKEMADLTFADAFTADFFATWGKLAAVRTPTIAAVAGYALGGGCELAMMCDVLIAADTAKFGQPQIKLGVLPGMGGSQRLTRAIGKAKAMDLILTGRTMDAAEAERSGLVSRVVPADDLLTEARATATTISQMSASAARMAKEAVNRAFESSLSEGLLYERRLFHSAFATEDQSEGMAAFIEKRAPQFTH-
General information:
TITO was launched using:
RESULT:
Template:
4FJW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -119847 for 2076 contacts (-57.7/contact) +
2D Compatibility (PS) -27567 + (NN) -8743 + (LL) 100
1D Compatibility (HY) -30800 + (ID) 12750
Total energy: -199607.0 ( -96.15 by residue)
QMean score : 0.416
(partial model without unconserved sides chains):
PDB file :
Tito_4FJW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4FJW-query.scw
PDB file :
Tito_Scwrl_4FJW.pdb
: