Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNGAAPTNGAPLSYPSICEGVHWGHLVGGHQPAY
2BW8 Chain:A ((53-74))
-------GNNVAAYPAIYFGCHWGACTSN-----
General information:
TITO was launched using:
RESULT:
Template:
2BW8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -5360 for 63 contacts (-85.1/contact) +
2D Compatibility (PS) -2439 + (NN) -1698 + (LL) 416
1D Compatibility (HY) -1600 + (ID) 350
Total energy: -11031.0 ( -175.10 by residue)
QMean score : 0.225
(partial model without unconserved sides chains):
PDB file :
Tito_2BW8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2BW8-query.scw
PDB file :
Tito_Scwrl_2BW8.pdb
: