Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MCSRMADEPRLEAGAHPFEEGRDKAPELRATQMDHVRFTEGRRERNRDRLERSQQFRQPGR
3SHG Chain:A ((134-146))
-------------ALHPFREGNGRTL-----------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3SHG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 1844 for 43 contacts (42.9/contact) +
2D Compatibility (PS) -1461 + (NN) -2620 + (LL) 3560
1D Compatibility (HY) -400 + (ID) 250
Total energy: 673.0 ( 15.65 by residue)
QMean score : 0.566
(partial model without unconserved sides chains):
PDB file :
Tito_3SHG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3SHG-query.scw
PDB file :
Tito_Scwrl_3SHG.pdb
: