Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSTVTGAAGIGLATLAADGSVLDTWFPAPELTESGTSATSRLAVSDVPVELAALIGRDDDRRTETIAVRTVIGSLDDVAADPYDAYLRLHLLSHRLVAPHGLNAGGLFGVLTNVVWTNHGPCAIDGFEAVRARLRRRGPVTVYGVDKFPRMVDYVVPTGVRIADADRVRLGAHLAPGTTVMHEGFVNYNAGTLGASMVEGRISAGVVVGDGSDVGGGASIMGTLSGGGTHVISIGKRCLLGANSGLGISLGDDCVVEAGLYVTAGTRVTMPDSNSVKARELSGSSNLLFRRNSVSGAVEVLARDGQGIALNEDLHAN |
| 5E3R Chain:A ((1-285)) | ----TTASATGIATLTSTGDVLDVWYP-----EIGSTDQSALT----PLE-----GVDEDRNVTRKIVTTTI-DIDAAPTDTYDAWLRLHLLSHRVFRPHTINLDGIFGLLNNVVWTNFGPCAVDGFALTRARLSRRGQVTVYSVDKFPRMVDYVVPSGVRIGDADRVRLGAYLADGTTVMHEGFVNFNAGTLGASMVEGRISAGVTVDDGTDVGGGASIMG--------VISLGKRCLLGANSGCGIPLGDDCIIEAGLYITAGTKV-LFDGSLHKASTLAGSNGLIFRRDSVSGQV-VAVPNTK----------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 5E3R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -186438 for 2321 contacts (-80.3/contact) +
2D Compatibility (PS) -30580 + (NN) -19960 + (LL) 2232
1D Compatibility (HY) -30400 + (ID) 9350
Total energy: -274496.0 ( -118.27 by residue)
QMean score : 0.526
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