Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDISRWLERHVGVQLLRLHDAIYRGTNGRIGHRIPGAPPSLLLHTTGAKTSQPRTTSLTYARDGDAYLIVASKGGDPRSPGWYHNLKANPDVEINVGPKRFGVTAKPVQPHDPDYARLWQIVNENNANRYTNYQSRTSRPIPVVVLTRR
3R5Z Chain:A ((17-145))
----------------RKQVETYENSGGTEGTTLQGKP-VVVLTTKGAKTGKLRKTPLMRVEHNGEYAVVASLGGAPKHPVWYHNIKAEPHVELRDGTEVGDYTAREVTGEE---KRVWWERAVEVWPDYAEYQTKTTREIPVFVLTPR
General information:
TITO was launched using:
RESULT:
Template:
3R5Z.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -43047 for 936 contacts (-46.0/contact) +
2D Compatibility (PS) -14150 + (NN) -8336 + (LL) 1408
1D Compatibility (HY) -6400 + (ID) 2500
Total energy: -73025.0 ( -78.02 by residue)
QMean score : 0.594
(partial model without unconserved sides chains):
PDB file :
Tito_3R5Z.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3R5Z-query.scw
PDB file :
Tito_Scwrl_3R5Z.pdb
: