Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAVHLTRIYTRTGDDGTTGLSDMSRVAKTDARLVAYADCDEANAAIGAALA--LGHPDTQITDVLRQIQNDLFDAGADLSTPIVENPKHPPLRIAQSYIDRLEGWCDAYNAGLPALKSFVLPGGSPLSALLHVARTVVRRAERSAWAAVDAHPE-GVSVLPAKYLNRLSDLLFILSRVANPDGDVLWRPGGDRTAS
3KE4 Chain:A ((31-187))
---------------GTTSVIG-GRVDKDDIRVEAYGTIDEANSHIGYAMTKLQGGAFIDIYNELENIQHELFDCGGDLA--IVE--QKIPYKVTIVMVESLERKIDLYIEEAPPLERFILPGGSEAAATIHIARTVVRRAERS---IVSLQKEVKINEVVLKYVNRLSDYLFAIARVIN----------------
General information:
TITO was launched using:
RESULT:
Template:
3KE4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -86312 for 1206 contacts (-71.6/contact) +
2D Compatibility (PS) -16795 + (NN) -9366 + (LL) 1304
1D Compatibility (HY) -12800 + (ID) 3550
Total energy: -127519.0 ( -105.74 by residue)
QMean score : 0.439
(partial model without unconserved sides chains):
PDB file :
Tito_3KE4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3KE4-query.scw
PDB file :
Tito_Scwrl_3KE4.pdb
: