Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMSGRAIGTETEWWVPGRVEIDDVAPVVSCGVYPAKAVVGEVVPVSAAVWREGHEAVAATLVVRYLGVRYPHLTDRP-----RARVLPTPSEPQQRVKPLLIPMTSGQEPFVFHGQFTPDRVGLWTFRVDGWGDPIHTWRHGLIAKLDAGQGETELSNDLLVGAVLLERAATGVPRGLRDPLLAAAAALRTPGDPVTRTALALTPEIEELLADYPLRDLVTRGEQFGVWVDRPLARFGAWYEMFPRSTGGWDDDGNPVHGTFATAAAELPRIAGMGFDVVYLPPIHPIGKVHRKGRNNSPTAAPTDVGSPWAIGSDEGGHDTVHPSLGTIDDFDDFVSAARDLGMEVALDLALQCAPDHPWAREHRQWFTELPDGTIAYAENPPKKYQDIYPLNFDNDPEGLYDEVLRVVQHWVNHGVKFFRVDNPHTKPPNFWAWLIAQVKTVDPDVLFLSEAFTPPARQYGLAKLGFTQSYSYFTWRTTKWELTEFGNQIAELADYRRPNLFVNTPDILHAVLQHNGPGMFAIRAVLAATMSPAWGMYCGYELFEHRAVREGSEEYLDSEKYELRPRDFASALDQGRSLQPFITRLNIIRRLHPAFQQLRTIHFHHVDNDALLAYSKFDPATGDCVLVVVTLNAFGPEEATLWLDMAALGMEDYDRFWVRDEITGEEYQWGQANYIRIDPARAVAHIINMPAVPYESRNTLLRRR
5CJ5 Chain:A ((1-695))-------------VAGRIVIDDVQPVVSNGRYPAKAVVGEVVPVAATVWREGHDAVAATLVVRYHGTTYPDLADPPPGVPG----------------PQRLPMSPGHTPDVFHGHFTPDRVGLWTYRVDGWGDPIASWRHNVTAKLDAGQGESELNNDLLVGARLLERAATGVPRELREALLEAAAALRAPGDPFTRAGAALSAEVSDLLAEYPLREFVTRGEQYGVWVDRPEARFSSWYEMFPRSTGGWDAEGRPVHGTFATAAEALPRIARMGFDVVYLPPIHPIGKVHRKGRNNSVTAAPGDVGSPWAIGSDEGGHDAVHPQLGTIEDFDEFVASARDLGLEVALDLALQCAPDHPWAREHPEWFTVLPDGSIAYAENPPKKYQDIYPLNFDNDPAGIYQEVLRVVRFWISHGVNIFRVDNPHTKPPNFWAWLIGQIKNENPDVLFLSEAFTRPARLYGLAKLGFTQSYTYFTWRTSKWELT-FGQEIAAKADIARPNLFVNTPDILHESLQHGGPGMFAIRAVLAATMGPAWGVYSGYELFENQPVRPGSEEYLNSEKYELRPRDFESALARGESLEPFLTRLNEIRRLHPALRELRTIRFHH------LAYSKFDPGTGDTVLVV---------------DMPELGMEPYDRFWVRDEITGEEYQWG-------DPAKAVAHVLNMPLIPADKRLQLLRR-


General information:
TITO was launched using:
RESULT:

Template: 5CJ5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		3D Compatibility (PKB) -300207 for 5216 contacts (-57.6/contact) +
2D Compatibility (PS) -68318 + (NN) -28281 + (LL) 4408
1D Compatibility (HY) -73200 + (ID) 25400
Total energy: -490998.0 ( -94.13 by residue)
QMean score : 0.485

(partial model without unconserved sides chains):
PDB file : Tito_5CJ5.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5CJ5-query.scw
PDB file : Tito_Scwrl_5CJ5.pdb: