Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTGFGLRLAEAKARRGPLCLGIDPHPELLRGWDLATTADGLAAFCDICVRAFADFAVVKPQVAFFESYGAAGFAVLERTIAELRAADVLVLADAKRGDIGATMSAYATAWVGDSPLAADAVTASPYLGFGSLRPL-LEVAAAHGRGVFVLAATSNPEGAAVQNA-AADGRSVAQLVVDQVGA-ANEAAGPGPGS-IGVVVGATAPQAPDLSAFTGP---VLVPGVGVQGGRPEALGGLGGAAS-SQLLPAVAREVLRAGPGVPELRAAGERMRDAVAYLAAV |
2FFC Chain:A ((133-351)) | ----------------------------------------------------------KMNFAFYLPYGSLGVDVLKNVFDYLHHLNVPTILDIKMNDIGNTVKHY-RKFIFDY-LRSDSCTANIYMGTQMLRDICLDEECKRYYSTFVLVKTTNADSHIFQNRLSLDGKEAYVVIAEEVQKMAKQLHLEENGEFVGFVVGANCYDEIKKIRELFPDCYILAPGVGAQKGDLRKMLCNGYSKNYEKVLINVGRAITKSGSPQQAAREYHQQIKEVLAEL--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2FFC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -82006 for 1587 contacts (-51.7/contact) +
2D Compatibility (PS) -22740 + (NN) -5491 + (LL) 4516
1D Compatibility (HY) -11600 + (ID) 3000
Total energy: -120321.0 ( -75.82 by residue)
QMean score : 0.420
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