Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPSLDNTADEKPAIDPILLKVLDAVPFRLSI--DDGIEAVRQR-------LRDLPRQPVHPELRVVDLAIDGPAGPIGTRIYWPPTCPDQAEAPVVLYFHGGGFVMGDLDTHDGTCRQHAVGADAIVVSVDYRLAPEHPYPAAIEDAWAATRWVAEHGRQVGADLGRIAVAGDSAGGTIAAVIAQRARDMGGPPIVFQLLWYPS-TLWDQSLPSLAENA--DAPILDVKAIAAFSRWYAGEIDLHNPPAPMAPGRAENLADLPPAYIAVAGYDPLRDDGIRYGELLAAAGVPVEVHNAQTLVHGYVGYAGVVPAATEATNRGLVALRVVLHG |
| 2YH2 Chain:A ((3-302)) | -------------LSPILRQILQQL-----FRPDMDVKTVREQFEKSSLILVKMANEPIH---RVEDITIPGRGGPIRARVYRPR---DGERLPAVVYYHGGGFVLGSVETHDHVCRRLANLSGAVVVSVDYRLAPEHKFPAAVEDAYDAAKWVADNYDKLGVDNGKIAVAGDSAGGNLAAVTAIMARDRGESFVKYQVLIYPAVNLTGSPTVSRVEYSGPEYVILTADLMAWFGRQYFSKP--QDALSPYASPIFADLSNLPPALVITAEYDPLRDEGELYAHLLKTRGVRAVAVRYNGVIHGFVNFYPILEEGREAVSQ----------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YH2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -192460 for 2516 contacts (-76.5/contact) +
2D Compatibility (PS) -31037 + (NN) -19161 + (LL) 1848
1D Compatibility (HY) -21600 + (ID) 6000
Total energy: -268410.0 ( -106.68 by residue)
QMean score : 0.523
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