Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MMPTEYPATAEESVDVITDALLTASRLLVAISAHSIAQVDENITIPQFRTLVILSNHGPINLATLATLLGVQPSATGRMVDRLVGAELIDRLPHPTSRRELLAALTKRGRDVVRQVTEHRRTEIARIVEQMAPAERHGLVRALTAFTEAGGEPDARYEIE
3VOE Chain:A ((37-111))
-----------------------------------------DITAAQFKVLCSIRCAACITPVELKKVLSVDLGALTRMLDRLVCKGWVERLPNPNDKRGVLVKLTTGGAAICEQC--------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3VOE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -54393 for 507 contacts (-107.3/contact) +
2D Compatibility (PS) -7608 + (NN) -2094 + (LL) 7632
1D Compatibility (HY) -8000 + (ID) 1300
Total energy: -65763.0 ( -129.71 by residue)
QMean score : 0.457
(partial model without unconserved sides chains):
PDB file :
Tito_3VOE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3VOE-query.scw
PDB file :
Tito_Scwrl_3VOE.pdb
: