Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTVVPGAPSRPASAVSRPSYRQCVQASAQTSARRYSFPSYRRPPAEKLVFPVLLGILTLLLSACQTASASGYNEPRGYDRATLKLVFSMDLGMCLNRFTYDSKLAPSRPQVVACDSREARIRNDGFHANAPSCMRIDYELITQNHRAYYCLKYLVRVGYCYPAVTTPGKPPSVLLYAPSACDESLPSPRVATAL-----VPGTRSANREFSRFVVTEIKSLGAGGRCDSASVSLQPPEEIEGPAIPPASSQLVCVAPK |
3SE9 Chain:L ((38-119)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------PGQPPKLLIFATSKRASGIPDRFSGSQFGKQYTLTITRMEPEDFARYYCQQLEFFGQGTRLEIRRTVAAPSVFI----FPPSDEQL------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3SE9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -12405 for 327 contacts (-37.9/contact) +
2D Compatibility (PS) -8289 + (NN) -6485 + (LL) 11104
1D Compatibility (HY) -5200 + (ID) 1050
Total energy: -22325.0 ( -68.27 by residue)
QMean score : 0.282
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