Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTAPAICNTTETVHGIATSLGAVARQASLPRIVGTVVGITVLVVVALLVPVPTAVELRDWAKSLGAWFPLAFLLVHTVVTVPPFPRTAFTLAAGLLFGSVVGVFIAVVGSTASAVIAMLLVRATGWQLNSLVRRRAINRLDERLRERGWLAILSLRLIPVVPFAAINYAAGASGVRILSFAWATLAGLLPGTAAVVILGDAFAGSGSPLLILVSVCTGALGLTGLVYEIRNYRRQHRRMPGYDDPVREPALI |
| 3L0Q Chain:A ((235-281)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LSQRAASEMGLIPGTAVSVSIIDAHAGT-----------IGILGASGVTGENANFDRR----------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3L0Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -7538 for 209 contacts (-36.1/contact) +
2D Compatibility (PS) -4718 + (NN) 2106 + (LL) 17432
1D Compatibility (HY) 800 + (ID) 1050
Total energy: 7032.0 ( 33.65 by residue)
QMean score : -0.238
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