Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MMAASHDDDTVDGLATAVRGGDRAALPRAITLVESTRPDHREQAQQLLLRLLPDSGNAHRVGITGVPGVGKSTAIEALGMHLIERGHRVAVLAVDPSSTRTGGSILGDKTRMARLAVHPNAYIRPSPTSGTLGGVTRATRETVVLLEAAGFDVILIETVGVGQSEVAVANMVDTFVLLTLARTGDQLQGIKKGVLELADIVVVNKADGEHHKEARLAARELSAAIRLIYPREALWRPPVLTMSAVEGRGLAELWDTVERHRQVLTGAGEFDARRRDQQVDWTWQLVRDAVLDRVWSNPTVRKVRSELERRVRAGELTPALAAQQILEIANLTDR |
| 3TK1 Chain:A ((8-329)) | ---------TVKDLAAAIRSGDRAALPRAITLVESTRADHRERAQELLLELMPDAGRAMHVGITGVPGVGKSTSIEALGMHLIEQGHRVAVLAVD-------------KTRMARLAVHP------------LGGVAKATRETIVLLEAAGFDVVLVETVGVGQSEVTVADMVDTFVFLTLARTGDQLQGIKKGVLELADIVVVNKADGEHAVEARKAARELAGAMRLI----TLWRPPVLTMSALEGTGVAELWETVLKHRQVLIDAGEFEKRRRDQEVNWMWTMVRDAVIDRVMTSPGVREIRAEVERQVREGELTAALAAQRLLDAAEL--- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3TK1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -182095 for 2206 contacts (-82.5/contact) +
2D Compatibility (PS) -32603 + (NN) -17248 + (LL) 548
1D Compatibility (HY) -36800 + (ID) 11500
Total energy: -279698.0 ( -126.79 by residue)
QMean score : 0.661
|
|
|