Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMGLLSRLRKREPISIYDKIGGHEAIEVVVEDFYVRVLADDQLSAFFSGTNMSRLKGKQVEFFAAALGGPEPYTGAPMKQVHQGRGITMHHFSLVAGHLADALTAAGVPSETITEILGVIAPLAVDVTSGESTTAPV
2GKM Chain:A ((2-128))-GLLSRLRKREPISIYDKIGGHEAIEVVVEDFFVRVLADDQLSAFFSGTNMSRLKGKQVEFFAAALGGPEPYTGAPMKQVHQGRGITMHHFSLVAGHLADALTAAGVPSETITEILGVIAPLAVDVTS--------


General information:
TITO was launched using:
RESULT:

Template: 2GKM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -93619 for 868 contacts (-107.9/contact) +
2D Compatibility (PS) -13816 + (NN) -7645 + (LL) 412
1D Compatibility (HY) -17600 + (ID) 6300
Total energy: -138568.0 ( -159.64 by residue)
QMean score : 0.526

(partial model without unconserved sides chains):
PDB file : Tito_2GKM.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2GKM-query.scw
PDB file : Tito_Scwrl_2GKM.pdb: