Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MADIPYGTDYPDAPWIDRDGHVLIDDGGKPTQVHRGQARIAYRLAERYQDKLLHVAGIGWHSWDGRRWAADDRGEAKRAVLAELRQALSDSLNDKELRADVRKCESASGVAGVLDLAAALVPFAATVADLDSDPHLLNVANGTLDLHTLKLRPHAPADRITKICRGAYQSDTESPLWQAFLTRVLP-DEGVRGFVQRLAGVGLLGTVREHVLAILIGVGANGKSVFDKAIRYALGDYACTAEPDLFMHRENAHPTGEMDLRGVRWVAVSESEKDRRLAE-STIKRLTGGDTIRARKMRQDFVEFTPSHTPLLITNHLPRVPGDDTAIWRRIRVVPFEVVIPADEQDRELDARLQLEADSILSWAVAGWSDYQRIGLSQPDAVLAATSNYREDSDTIKRFIDDECVTSSPVLKATTTHLFEAWQRWRVQEGVPEISRKAFGQSLDTHGYPVTDKARDGRWRAGIAVRGADDFDD |
| 1TUE Chain:A ((444-622)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GDWRPIVQFLRYQQIEFITFLGALKSFLK-G-TPKKNCLVFCGPANTGKSYFGMSFIHFIQGAVISFVNS--T-----SHFWLEPLTDTKVAMLDDATTTCWTYFDTYMRNALDGNPISID----PLIQLKCPP-ILLTTNIHPAKDNRWPYLESRITVFEFPNAFPFDKNGNPVYEINDKNWKCFFER-------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1TUE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -39357 for 1303 contacts (-30.2/contact) +
2D Compatibility (PS) -18859 + (NN) -8878 + (LL) 17948
1D Compatibility (HY) -5600 + (ID) 1150
Total energy: -55896.0 ( -42.90 by residue)
QMean score : 0.180
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