Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMMPLILLPAVDVVEGRAVRLVQGKAGSQTEYGSAVDAALGWQRDGAEWIHLVDLDAAFGRGSNHELLAEVVGKLDVQVELSGGIRDDESLAAALATGCARVNVGTAALENPQWCARVIGEHGDQVAVGLDVQIIDGEHRLRGRGWETDGGDLWDVLERLDSEGCSRFVVTDITKDGTLGGPNLDLLAGVADRTDAPVIASGGVSSLDDLRAIATLTHRGVEGAIVGKALYARRFTLPQALAAVRD
5DN1 Chain:A ((1-239))MSKLELLPAVDVRDGQAVRLVHGESGTETSYGSPLEAALAWQRSGAEWLHLVDLDAAFGTGDNRALIAEVAQAMDIKVELSGGIRDDDTLAAALATGCTRVNLGTAALETPEWVAKVIAEHGDKIAVGLDVR----GTTLRGRGWTRDGGDLYETLDRLNKEGCARYVVTDIAKDGTLQGPNLELLKNVCAATDRPVVASGGVSSLDDLRAIAGLVPAGVEGAIVGKALYAKAFTLEEALEAT--


General information:
TITO was launched using:
RESULT:

Template: 5DN1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -148456 for 2116 contacts (-70.2/contact) +
2D Compatibility (PS) -25848 + (NN) -9365 + (LL) 184
1D Compatibility (HY) -26400 + (ID) 8250
Total energy: -218135.0 ( -103.09 by residue)
QMean score : 0.697

(partial model without unconserved sides chains):
PDB file : Tito_5DN1.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5DN1-query.scw
PDB file : Tito_Scwrl_5DN1.pdb: