Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSAYKTVVVGTDGSDSSMRAVDRAAQIAGAD-AKLIIASAYLPQHEDARAADILKDESYKVTGTAPIYEILHDAKERAHN--------AGAKNVEERPIVGAPVDALVNLADEEKADLLVVGNVGLSTIAGRLLGSVPANVSRRAKVDVLIVHTT
2Z09 Chain:A ((2-136))
---FKTILLAYDGSEHARRAAEVAKAEAEAHGARLIVVHAYEP---------------------------LRRRLERAEGVLEEARALTGVPKEDALLLEGVPAEAILQAARAEKADLIVMGTRGLGALGSLFLGSQSQRVVAEAPCPVLLV---
General information:
TITO was launched using:
RESULT:
Template:
2Z09.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -63271 for 874 contacts (-72.4/contact) +
2D Compatibility (PS) -12310 + (NN) -755 + (LL) 2452
1D Compatibility (HY) -6400 + (ID) 2100
Total energy: -82384.0 ( -94.26 by residue)
QMean score : 0.585
(partial model without unconserved sides chains):
PDB file :
Tito_2Z09.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2Z09-query.scw
PDB file :
Tito_Scwrl_2Z09.pdb
: