Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSDFDTERVSRAVAAALVGPGGVALVVKVFAGLPGVIHTPARRGFFRSNPERIQIGDWRYEVAHDGRLLAAHMVNGIVIAEDALIAEAVGPHLARALGQIVSRYGATVIPNINAAIEVLGTGTDYRF
2JKT Chain:A ((175-211))
--------------------------------------------LYRTSPDLVPMGDWTSRVVH--LLNDQHL--GVVTAATSLI------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2JKT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -11673 for 163 contacts (-71.6/contact) +
2D Compatibility (PS) -3681 + (NN) 731 + (LL) 5528
1D Compatibility (HY) -3600 + (ID) 700
Total energy: -13395.0 ( -82.18 by residue)
QMean score : 0.024
(partial model without unconserved sides chains):
PDB file :
Tito_2JKT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2JKT-query.scw
PDB file :
Tito_Scwrl_2JKT.pdb
: