Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKVRLDPSRCVGHAQCYAVDPDLFPIDDSGNSILAEHEVRPEDM-QLTRDGVAACPEMALILEEDDAD
1SIZ Chain:A ((2-65))
WKVSVDQDTCIGDAICASLCPDVFEMNDEGKAQPKVEVIEDEELYNCAKEAMEACPVSAITIEE----
General information:
TITO was launched using:
RESULT:
Template:
1SIZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -34965 for 436 contacts (-80.2/contact) +
2D Compatibility (PS) -6607 + (NN) -2402 + (LL) -84
1D Compatibility (HY) -4800 + (ID) 950
Total energy: -49808.0 ( -114.24 by residue)
QMean score : 0.475
(partial model without unconserved sides chains):
PDB file :
Tito_1SIZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SIZ-query.scw
PDB file :
Tito_Scwrl_1SIZ.pdb
: