Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKDKLHWLAMHGVIRGIAAIGIRRGDLQARLIADPAVATDPVPFYDEVRSHGALVRNRANYLTVDHRLAHDLLRSDDFRVVSFGENLPPPLRWLERRTRGDQLHPLREPSLLAVEPPDHTRYRKTVSAVFTSRAVSALRDLVEQTAINLLDRFAEQPGIVDVVGRYCSQLPIVVISEILGVPEHDRPRVLEFGELAAPSLDIGIPWRQYLRVQQGIRGFDCWLEGHLQQLRHAPGDDLMSQLIQIAESGDNETQLDETELRAIAGLVLVAGFETTVNLLGNGIRMLLDTPEHLATLRQHPELWPNTVEEILRLDSPVQLTARVACRDVEVAGVRIKRGEVVVIYLAAANRDPAVFPDPHRFDIERPNAGRHLAFSTGRHFCLGAALARAEGEVGLRTFFDRFPDVRA---AGAGSRRDTRVLRGWSTLPVTLGPARSMVSP |
1JIO Chain:A ((93-401)) | ------------------------------------------------------------------------------------------------------------------DPPTHTRLRKLVSQEFTVRRVEAMRPRVEQITAELLDEVGDS-GVVDIVDRFAHPLPIKVICELLGVDEKYRG---EFGRWSSEIL-VMDPERAEQR-GQAAREVVNFILDLVERRRTEPGDDLLSALIRVQD--DDDGRLSADELTSIALVLLLAGFEASVSLIGIGTYLLLTHPDQLALVRRDPSALPNAVEEILRYIAPPETTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQFPDPHRFDVTRDTRG-HLSFGQGIHFCMGRPLAKLEGEVALRALFGRFPALSLGIDADDVVWRRSLLLRGIDHLPVRL--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1JIO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -172256 for 2307 contacts (-74.7/contact) +
2D Compatibility (PS) -32998 + (NN) -15170 + (LL) 8204
1D Compatibility (HY) -25200 + (ID) 7000
Total energy: -244420.0 ( -105.95 by residue)
QMean score : 0.462
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