Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLTTMIKTAVAVVAMAAIATFAAPVALAAYPITGKLGSELTMTDTVGQVVLGWKVSDLKSSTAVI-PGY-----PVAGQVWEATATVNAIRGSVTPAV--SQFNARTADGINYRVLWQAA-------GPDTISGATIPQGEQSTGKIYFDVTGPSPTIVAMNNGMEDLLIWEP
4LES Chain:A ((67-186))
-----------------------------IKEKEYAVNKDFHTP---K---FDVTVKRVVERDKVGKESIGFQKPEDGHVFIVVEAEGKNITSEPMKLAFLPSVDLVDENDNAYQSDVWAASSYDVEKGETSSITKELKPGEVKRQNKVYVINKE-------------------
General information:
TITO was launched using:
RESULT:
Template:
4LES.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -15605 for 607 contacts (-25.7/contact) +
2D Compatibility (PS) -11466 + (NN) -5301 + (LL) 5804
1D Compatibility (HY) -2000 + (ID) 500
Total energy: -29068.0 ( -47.89 by residue)
QMean score : 0.320
(partial model without unconserved sides chains):
PDB file :
Tito_4LES.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4LES-query.scw
PDB file :
Tito_Scwrl_4LES.pdb
: