Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSTSTTIRVSTQTRDRLAAQARERGISMSALLTELAAQAERQAIFRAEREASHAETTTQAVRDEDREWEGTVGDGLG
3VEB Chain:B ((103-145))
---------------RLAVLARRRGNTLSDTVVQLIEDAERK-----EKYASQMSSLKQDLKD--------------
General information:
TITO was launched using:
RESULT:
Template:
3VEB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 1169 for 192 contacts (6.1/contact) +
2D Compatibility (PS) -4829 + (NN) -2535 + (LL) 1896
1D Compatibility (HY) -1200 + (ID) 850
Total energy: -6349.0 ( -33.07 by residue)
QMean score : 0.621
(partial model without unconserved sides chains):
PDB file :
Tito_3VEB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3VEB-query.scw
PDB file :
Tito_Scwrl_3VEB.pdb
: