Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLDYLRDAAEIYRRSFAVIRAEADLARFPADVARVVVRLIHTCGQVDVAEHVAYTDDVVARAGAALAAGAPVLCDSSMVAAGITTSRLPADNQIVSLVADPRATELAARRQTTRSAAGVELCAERLPGAVLAIGNAPTALFRLLELVDEGAPP-PAAVLGGPVGFVGSAQAKEEL-IERPRGMSYLVVRGRRGGSAMAAAAVNAIASDRE
4AU1 Chain:A ((24-229))
--EYEKDGAKIYVQSFATIRAEADLARFTPEEEVVVVRMIHAAGMVGLENHVRFAPGMAIAARAALEAGAPILCDARMVSEGITRARLPAKNEVICTLQDPRVPALAQEMGNTRSAAALELWRPKLEGAVVAIGNAPTALFHLLNMLEDPACPRPAAIIGCPVGFIGAAESKAALAVANP--VPWVIVEGRLGGSAITVAAVNALACRKE
General information:
TITO was launched using:
RESULT:
Template:
4AU1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -152318 for 1764 contacts (-86.3/contact) +
2D Compatibility (PS) -22799 + (NN) -12482 + (LL) 312
1D Compatibility (HY) -20400 + (ID) 5300
Total energy: -212987.0 ( -120.74 by residue)
QMean score : 0.699
(partial model without unconserved sides chains):
PDB file :
Tito_4AU1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4AU1-query.scw
PDB file :
Tito_Scwrl_4AU1.pdb
: