Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MANASETNVGPMAPRVCVVGSVNMDLTFVVDALPRPGETVLAASLTRTPGGKGANQAVAAARAGAQVQFSGAFGDDPAAAQLRAHLRANAVGLDRTVTVPGPS-GTAIIVVDASAENTVLVAPGANAHLTPV-----PSAVANCDVLLTQLEIPVATALAAARAAQSADAVVMVNASPAGQDRSSLQDLAAIADVVIANEHEA---------NDWPSPP----TH------FVITLGVRGARYVGADGVFE-VPAPTVTPVDTAGAGDVFAGVLAANWPRNPGSPAERLRALRRACAAGALATLVSGVGDCAPAAAAIDAALRANRHNGS |
| 1RKS Chain:A ((7-261)) | ---------------LVVLGSINADHILNLQSFPTPGETVTGNHYQVAFGGKGANQAVAAGRSGANIAFIACTGDDSIGESVRQQLATDNIDITPVSVIKGESTGVALIFVNGEGENVIGIHAGANAALSPALVEAQRERIANASALLMQLESPLESVMAAAKIAHQNKTIVALNPAPA---RELPDELLALVDIITPNETEAEKLTGIRVENDEDAAKAAQVLHEKGIRTVLITLGSRGV-WASVNGEGQRVPGFRVQAVDTIAAGDTFNGAL-------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1RKS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -106531 for 1854 contacts (-57.5/contact) +
2D Compatibility (PS) -25697 + (NN) -13072 + (LL) 3736
1D Compatibility (HY) -10800 + (ID) 4550
Total energy: -156914.0 ( -84.64 by residue)
QMean score : 0.501
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