Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNFYSAYQHGFVRVAACTHHTTIGDPAANAASVLDMARACHDDGAALAVFPELTLSGYSIEDVLLQDSLLDAVEDALLDLVTESAD----LLPVLV----------------VGAPLRHRHRIYNTAVVIHRGAVLGVVPKSYLPTYREFYERRQMAPGDGERGTIRIGGADVAFGTDLLFAASDLPGFVLHVEICEDMFVPMPPSAEAALAGATVLANLSGSPITIGRAEDRRLLA--RSASARCLAAYVYAAAGEGESTTDLAWDGQTMIWE-NGALLAESERFPKGVRRSVADVDTELLRSERLRMGTFDDNRRHHRELTESFRRIDFALDPPAGDIGLLREVERFPFVPAD-----PQRLQQDCYEAYNIQVSGLEQRLRALDYPKVVIGVSGGLDSTHALIVATHAMDREGRPRSDILAFALPGFATGEHTKNNAIKLARALGVTFSEIDIGDTARLMLHTIGHPYSVGEKVYDVTFENVQAGLRTDYLFRIANQRGGIVLGTGDLSELALGWSTYGVGDQMSHYNVNAGVPKTLIQHLIRWVISAGEFGEKVGEVLQSVLDTEITPELIPTGEEELQSSEAKVGPFALQDFSLFQVLRYGFRPSKIAFLAWHAWNDAERGNWPPGFPKSERPSYSLAEIRHWLQIFVQRFYSFSQFKRSALPNGPKVSHGGALSPRGDWRAPSDMSARIWLDQIDREVPKG |
| 3N05 Chain:A ((5-487)) | -----------LRLALNQIDSTVGDIAGNAEAILRWTRHSAEQGAHLVAFPEMALTGYPVEDLALRSSFVEASRTALRELAARLAEEGFGELPVLVGYLDRSESAQPKYGQPAGAP-------RNAAAVLHRGRVALTFAKHHLPNYGVFDEFRYFVPGD-TMPIVRLHGVDIALA------------------ICEDLWQDGGRVPAARSAGAGLLLSVNASPYERDKDDTRLELVRKRAQEAGCTTAYLAMIGGQDE----LVFDGDSIVVDRDGEVVARAPQFSEGC--VVLDLDLPAAEAEP-PTGVVDDGLRIDR---------------------LVISEEPLPAYEAELAGGYADRLDAD-EEVYSALVVGLRAYVAKNGFRSVLIGLSGGIDSALVAAIACDALGAQ-----NVYGVSMPSKYSSDHSKGDAAELARRTGLNFRTVSIEPMFDAYMASLG--------LTGLAEENLQSRLRGTTLMAISNQEGHIVLAPGNKSELAVGYSTL-YGDSVGAYGPIKDVYKTSIFRLAEW---------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3N05.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -257355 for 3753 contacts (-68.6/contact) +
2D Compatibility (PS) -47184 + (NN) -15580 + (LL) 12916
1D Compatibility (HY) -26000 + (ID) 7800
Total energy: -341003.0 ( -90.86 by residue)
QMean score : 0.422
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