Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTTARDIMNAGVTCVGEHETLTAAAQYMREHDIGALPICGDDDRLHGMLTDRDIVIKGLAAGLDPNTATAGELARDSIYYVDANASIQEMLNVMEEHQVRRVPVISEHRLVGIVTEADIARHLPEHAIVQFVKAICSPMALAS
2RC3 Chain:A ((19-127))
-----------VVAIGPDDSVFNAMQKMAADNIGALLVMKDE-KLVGILTERDFSRKSYLLDKPVKDTQVKEIMTRQVAYVDLNNTNEDCMALITEMRVRHLPVLDDGKVIGLLSIGDLVK----------------------
General information:
TITO was launched using:
RESULT:
Template:
2RC3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -62565 for 757 contacts (-82.6/contact) +
2D Compatibility (PS) -11886 + (NN) -5619 + (LL) 2864
1D Compatibility (HY) -9200 + (ID) 1450
Total energy: -87856.0 ( -116.06 by residue)
QMean score : 0.463
(partial model without unconserved sides chains):
PDB file :
Tito_2RC3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2RC3-query.scw
PDB file :
Tito_Scwrl_2RC3.pdb
: