Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTDSEHVGKTCQIDVLIEEHDERTRAKARLSWAGRQMVGVGLARLDPADEPVAQIGDELAIARALSDLANQLFALTSSDIEASTHQPVTGLHH
1IZM Chain:A ((86-126))
---------------LTEDENVFTQADSLSDWANQFLLGIGLAQPELAKEK-GEIGE------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1IZM.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 3511 for 179 contacts (19.6/contact) +
2D Compatibility (PS) -4423 + (NN) -3839 + (LL) 3960
1D Compatibility (HY) -1600 + (ID) 700
Total energy: -3091.0 ( -17.27 by residue)
QMean score : 0.228
(partial model without unconserved sides chains):
PDB file :
Tito_1IZM.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1IZM-query.scw
PDB file :
Tito_Scwrl_1IZM.pdb
: