Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAETAPLRVQLIAKTDFLAPPDVPWTTDADGGPALVEFAGRACYQSWSKPNPKTATNAGYLRHIIDVGHFSVLEHASVSFYITGISRSCTHELIRHRHFSYSQLSQRYVPEKDSRVVVPPGMEDDADLRHILTEAADAARATYSELLAKLEAKFADQPNAILRRKQARQAARAVLPNATETRIVVTGNYRAWRHFIAMRASEHADVEIRRLAIECLRQLAAVAPAVFADFEVTTLADGTEVATSPLATEA
3FNN Chain:A ((9-251))
--EQVKLSVELIACSSFTPPADVEWSTDVEGAEALVEFAGRACYETFDKPNPRTASNAAYLRHIMEVGHTALLEHANATMYIRGISRSATHELVRHRHFSFSQLSQ-------SEVVVPTLIDEDPQLRELFMHAMDESRFAFNELLNALEEK---------RKKQARQAARAVLPNATESRIVVSGNFRTWRHFIGMRASEHADVEIREVAVECLRKLQVAAPTVFGDFEIETLADGSQMATSP-----
General information:
TITO was launched using:
RESULT:
Template:
3FNN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -129969 for 1702 contacts (-76.4/contact) +
2D Compatibility (PS) -24886 + (NN) -11475 + (LL) 1932
1D Compatibility (HY) -23200 + (ID) 7350
Total energy: -194948.0 ( -114.54 by residue)
QMean score : 0.610
(partial model without unconserved sides chains):
PDB file :
Tito_3FNN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3FNN-query.scw
PDB file :
Tito_Scwrl_3FNN.pdb
: