Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRRRLAIVQRWRGQDEI--PTDWGRCVLTIGVFDGVHRGHAELIAHAVKAGRARGVPAVLMTFDPHPMEVVYPGSHPAQLTTLTRRAELVQDL---GIEVFLVMPFTTDFMKLTPDRFIHELLVEHLHVVEVVVGENFTFGKKAAGNVDTLRRAGERFGFAVESMSLVSEHHSNETVTFSSTYIRSCVDAGDMVAAMEALGRPHRVEGVVVRGEGRGAELGFPTANVAPPMYSAIPADGVYAAWFTVLGHGPVTGTVVPGERYQAAVSVGTNPTFSGRTRTVEAFVLDTTADLYGQHVALDFVGRIRGQKKFESVRQLVAAMGADTERARDLLSTG |
3OP1 Chain:A ((11-306)) | -----------KNQKDIGTPSD---SVVVLGYFDGIHKGHQELFRVANKAARKDLLPIVVMTFNESPKIALEP-YHPDLFLHILNPAERERKLKREGVEELYLLDFSSQFASLTAQEFF-ATYIKAMNAKIIVAGFDYTFGSD--------KKTAEDLKNYFDGEVIIVPPVEDEKGKISSTRIRQAILDGNVKEAGKLLGAPLPSRGMVVHGN------GYPTANLVLLDRTYMPADGVY-----------VVDVEIQRQKYRAMASVGKNVTFD--EARFEVNIFDFNQDIYGETVMVYWLDRIRDMTKFDSVDQLVDQLKADEEVTRN----- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3OP1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -180647 for 2204 contacts (-82.0/contact) +
2D Compatibility (PS) -31029 + (NN) -12468 + (LL) 2804
1D Compatibility (HY) -18400 + (ID) 4900
Total energy: -244640.0 ( -111.00 by residue)
QMean score : 0.495
|
|
|