Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPTRSREEYFNLPLKVDESSGTIGKMFVLVIYDISDN-----RRRASLAKILAGFGYRVQESAFEAMLTKGQLAKLVARIDRFAID--CDNIRIYKIRGVAAVTFYGRGRLVSAEEFVFF
4QR0 Chain:A ((1-69))
-------------------------MMVLVTYDVNTETPAGRKRLRHVAKLCVDYGQRVQNSVFECSVTPAEFVDIKHRLTQI-IDEKTDSIRFY-------------------------
General information:
TITO was launched using:
RESULT:
Template:
4QR0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -55614 for 397 contacts (-140.1/contact) +
2D Compatibility (PS) -6694 + (NN) -2965 + (LL) 3484
1D Compatibility (HY) -6800 + (ID) 1200
Total energy: -69789.0 ( -175.79 by residue)
QMean score : 0.773
(partial model without unconserved sides chains):
PDB file :
Tito_4QR0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4QR0-query.scw
PDB file :
Tito_Scwrl_4QR0.pdb
: