Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTTIDPRSELVDGRRRAGARVDAVGAAALLSAAARVGVVCHVHPDADTIGAGLALALVLDGCGKRVEVSFAAPATLPESLRSLPGCHLLVRPEVMRR-------DVDLVVTVDIPSVDRLGALGDLT--DSGRELLVIDHHASNDLFGTANFIDPSADSTTTMVAEIL--DAWGKPIDPRVAHCIYAGLATDTGSFRWASVRG--YRLAARLVEIGVDNATVSRTLMDSHPFTWLPLLSRVLGSAQLVSEAVGGRGLVYVVVDNREWVAARSEEVESIVDIVRTTQQAEVAAVFKE-VEPHRWSVSMRA--KTVNLAAVASGFGGGGHRLAAGYTTTGSIDDAVASLRAALG |
4PY9 Chain:A ((18-334)) | -----------------------------FERADKIVIVSHVSPDGDAIGSSLGLYHFLDSQDKIVNV--IVPNAFPDFLKWMPGSKDILLYDRYQEFADKLIMEADVICCLDFNALKRIDEMSDIVAASPGRK-IMIDHHLYPEDFCRITISHPEISSTSELVFRLICRMGYFSDISKEGAECIYTGMMTDTGGFTYNSNNREIYFIISELLSKGIDKDDIYRKVYNTYSESRLRLMGYVLSNMKVYKDY--NSALISLTKEEQGKFDYIKGDSEGFVNIPLSIKNVCFSCFLREDTE--MIKISLRSVGKFPCNRLAAEFFNGGGHLNASGGEFYGTMEEAVKVFEQAL- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4PY9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -210385 for 2476 contacts (-85.0/contact) +
2D Compatibility (PS) -31862 + (NN) -9606 + (LL) 2032
1D Compatibility (HY) -20400 + (ID) 3950
Total energy: -274171.0 ( -110.73 by residue)
QMean score : 0.380
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