Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNIDMAALHAIEVDRGISVNELLETIKSALLTAYRHTQGHQTDARIEIDRKTG--VVRVIARETDEAGNLISEWDDTPEGFGRIAATTARQVMLQRFRDAENERTYGEFSTREGEIVAGVIQRDSRANARGLVVVRIGTETKASEGVIPAAEQVPGESYEHGNRLRCYVVGVTRGAREPLITLSRTHPNLVRKLFSLEVPEIADGSVEIVAVAREAGHRSKIAVRSNVAGLNAKGACIGPMGQRVRNVMSELSGEKIDIIDYDDDPARFVANALSPAKVVSVSVIDQTARAARVVVPDFQLSLAIGKEGQNARLAARLTGWRIDIRGDAPPPPPGQPEPGVSRGMAHDR |
4MTN Chain:A ((12-312)) | -------VDSIHRDKSIDKEIVFEGVEQAILSAARKHFGEEEVIEVHIDRTSGQPMVKTNGREIDR--------DELGDILGRISAQT-KQVMIQKIREAERDTLFDEYAQLRGQIVSGTVTR----NEGSAITVNIGK----AEAILPRSEMIPGESHRPNERIRAVVLEVKKMGPRVRVVLSRAHPDFVRRLLELEIPEVNERIIEIRSLAREAGYRTKVAVSCADSNIDPVGACVGVRGARIRNVGEELGGERIEVVRWNDSLQVLVPNAMQPSEVEDVILCPMLGRVL-VLVRDDQLSLAIGKRGQNVRLASKLVGWDIDV------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4MTN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -130549 for 2215 contacts (-58.9/contact) +
2D Compatibility (PS) -31983 + (NN) -10321 + (LL) 1412
1D Compatibility (HY) -23600 + (ID) 5900
Total energy: -200941.0 ( -90.72 by residue)
QMean score : 0.481
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