Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNEALIGLAFAAGLVAALNPCGFAMLPAYLLLVVYGQDSAGRTGPLSAVGRAAAATVGMALGFLTVFGIFGALTISAATAVQRYLPYATVLIGLALIALGGWLLLGRGLTALTPRSLGVRWAPTVRLGSMYGYGISYAVASLSCTIGPFLAVTGAGLRGGSVVGSVAIYLAYVAGLTLVVGVLAVAAATASSALADRLRRILPFVNRISGALLVVVGLYVGYYGLYELRLIAGVGANPQDAVIAAAGRLQGALAGWVNQHGAWPWAVLLVVLVVGAFAGTWFRRVRR |
4PIF Chain:A ((29-86)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VKIFSGDVVDGVDVTFTYYGKTETRHYGGSGGTPHEIVLQEGEYLVGMAGEVANYHGA------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4PIF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -25276 for 272 contacts (-92.9/contact) +
2D Compatibility (PS) -5938 + (NN) 1589 + (LL) 18488
1D Compatibility (HY) -1600 + (ID) 950
Total energy: -13687.0 ( -50.32 by residue)
QMean score : -0.192
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