Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRARPLTLLTALAAVTLVVVAGCEARVEAEAYSAADRISSRPQARPQPQPVELLLRAITPPRAPAAS--PNVGFGELPTRVRQATDEAAAMGATLSVAVLDRATGQLVSNGNTQIIATASVAKLFIADDLLLAEAEGKVTL-----------SPE-----------DHHALDV---MLQSSDDGAAERFWSQDGGNAVVTQVARRYGLRSTA---PPSDGRWWNTISSAPDLIRYYDMLLDGSGGLPLDRAAVIIADLAQSTPTGIDGYPQRFGIPDGL-YAEPVAVKQGWM-CCIGSSWM-HLSTGVIGPERRYIMVIESLQPADDATARATITQAVRTMFPNGRI
2J8Y Chain:A ((10-268))------------------------------------------------------------------TLPPERPLTNLQQQIQQLVSRQPNLTAGLYFFNLD--SGASLNVGGDQVFPAASTIKFPILVAFFKAVDEGRVTLQERLTMRPDLIAPEAGTLQYQKPNSQYAALEVAELMITISDNTATNMIIDRLGGAAELNQQFQEWGLENTVINNPLPDMKGTNT-TSPRDLATL--MLKIGQGEILSPRSRDRLLDIMRRTVTNT-------LLPAGLGKGATIAHKTGDIGIVVGDAGMVDMPNG-----QRYVAAMMVKRPYNDPRGSELIRQVSRMVY-----


General information:
TITO was launched using:
RESULT:

Template: 2J8Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -96678 for 1890 contacts (-51.2/contact) +
2D Compatibility (PS) -25159 + (NN) -12053 + (LL) 6436
1D Compatibility (HY) -9200 + (ID) 3350
Total energy: -140004.0 ( -74.08 by residue)
QMean score : 0.478

(partial model without unconserved sides chains):
PDB file : Tito_2J8Y.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2J8Y-query.scw
PDB file : Tito_Scwrl_2J8Y.pdb: