Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRIDIVTIFPACLDPLRQ-SLPGKAIESGLVDLNVHDLRRWTHDVHHSVDDAPYGGGPGMVMKAPVWGEALDEICSSETL---LIVPTPAGVLFTQATAQRWTTESHLVFACGRYEGIDQRVVQDAARRMRVEEVSIGDYVLPGGESAAVVMVEAVLRLLAGVLGNPASHQDDSHSTGLDGLLEGPSYTRPASWRGLDVPEVLLSGDHARIAAWRREVSLQRTRERRPDLSHPD
1P9P Chain:A ((7-229))
MWIGIISLFPEMFRAITDYGVTGRAVKNGLLSIQSWSPRDFTHDRHRTVDDRPYGGGPGMLMMVQPLRDAIHAAKAAAGEGAKVIYLSPQGRKLDQAGVSELATNQKLILVCGRYEGIDERVIQTEID----EEWSIGDYVLSGGELPAMTLIDSVSRFIPGVLG--------------EGLLDCPHYTRPEVLEGMEVPPVLLSGNHAEIRRWRLKQSLGRTWLRRPEL----
General information:
TITO was launched using:
RESULT:
Template:
1P9P.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -131210 for 1479 contacts (-88.7/contact) +
2D Compatibility (PS) -22245 + (NN) -7691 + (LL) 352
1D Compatibility (HY) -19600 + (ID) 4650
Total energy: -185044.0 ( -125.11 by residue)
QMean score : 0.361
(partial model without unconserved sides chains):
PDB file :
Tito_1P9P.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1P9P-query.scw
PDB file :
Tito_Scwrl_1P9P.pdb
: