Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIRSRQPLLDALGVDLPDE-LLSLALTHRSYAYENGGLPTNERLEFLGDAVLGLTITDALFHRHPDRSEGDLAKLRASVVNTQALADVARRLCAEGLGVH--VLLGRGEANTGGADKSSILADGMESLLGAIYLQHGMEK--AREVILRLFGP-LLDAAPTLGAGLDWKTSLQELTAARGLGAPSY-LVTSTGPDHDKEFTAVVVVMDSEYGS-GVGRSKKEAEQKAAAAAWKALEVLDNAMPGKTSA
1YYK Chain:A ((5-218))-----EQLEKKLGYTFKDKSLLEKALTHVSYSKKEH----YETLEFLGDALVNFFIVDLLVQYSPNKREGFLSPLKAYLISEEFF-----NLLAQKLELHKFIRIKRGKIN------ETIIGDVFEALWAAVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVEGPHHKKKF--IVEAKIKEYRTLGEGKSKKEAEQRAAEELIKLLE------------


General information:
TITO was launched using:
RESULT:

Template: 1YYK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -104688 for 1487 contacts (-70.4/contact) +
2D Compatibility (PS) -22835 + (NN) -13903 + (LL) 1524
1D Compatibility (HY) -17200 + (ID) 4100
Total energy: -161202.0 ( -108.41 by residue)
QMean score : 0.493

(partial model without unconserved sides chains):
PDB file : Tito_1YYK.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1YYK-query.scw
PDB file : Tito_Scwrl_1YYK.pdb: