Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MADKSKRPPRFDLKSADGSFGRLVQIGGTTIVVVFAVVLVFYIVTSRDDKKDGVAGPGDAVRVTSSKLVTQPGTSNPKAVVSFYEDFLCPACGIFERGFGPTVSK-LVDIGAVAADYTMVAILDSASNQHYSSRAAAAAYCVADESIEAFRRFHAALFSKDIQPAELGKDFPDNARLIELAREAGVVGKVPDCINSG-------KYIEKVDGLAAAVNVHATPTVRVNGTEYEWSTPAALVAKIKEIVGDVPGIDSAAATATS |
3EU3 Chain:A ((30-170)) | ----------------------------------------------------------------------------PVTVVEFG-DYKCPSCKVFNSDIFPKIQKDFIDKGDVKFSFVNVMFHGKGS-----RLAALASEEVWKEDPDSFWDFHEKLFEK--QP-DTEQEWVTPGLLGDLAKSTTKIK--PETLKENLDKETFASQVEKDSDLNQKMNIQATPTIYVN----------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3EU3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -75235 for 971 contacts (-77.5/contact) +
2D Compatibility (PS) -13961 + (NN) -2197 + (LL) 6876
1D Compatibility (HY) -7200 + (ID) 2150
Total energy: -93867.0 ( -96.67 by residue)
QMean score : 0.349
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