Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLIRWHIQLGNIVIPKSVNPMRIASNFDAFDFPRSMTEPGLVRIRKPSISQAGEMT
1MZR Chain:A ((237-276))
IVIRWHLDSGLVVIPKSVTPSRIAENFDVWDFRLDKDELG----------------
General information:
TITO was launched using:
RESULT:
Template:
1MZR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3536 for 192 contacts (-18.4/contact) +
2D Compatibility (PS) -4285 + (NN) -838 + (LL) 1300
1D Compatibility (HY) -4000 + (ID) 1100
Total energy: -12459.0 ( -64.89 by residue)
QMean score : 0.116
(partial model without unconserved sides chains):
PDB file :
Tito_1MZR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1MZR-query.scw
PDB file :
Tito_Scwrl_1MZR.pdb
: