Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDIAGRSLVYFSSVSENTHRFVQKLGIPATRIPLHGRIEVDEPYVLILPTYGGGRANPGLDAGGYVPKQVIAFLNNDHNRAQLRGVIAAGNTNFGAEFCYAGDVVSRKCSVPYLYRFELMGTEDDVAAVRTGLAEFWKEQTCHQPSLQSL
2X2P Chain:A ((2-112))
-------LVAYDSMTGNVKRFIHKLNMPAVQID--EDLVIDEDFILITYTTGFGN----------VPERVLDFL--ERNNEKLKGVSASGNRNWGDMFGASADKISTKYEVPIVSKFELSGTNNDV--------EYFKER----------
General information:
TITO was launched using:
RESULT:
Template:
2X2P.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -100617 for 863 contacts (-116.6/contact) +
2D Compatibility (PS) -11680 + (NN) -3824 + (LL) 1512
1D Compatibility (HY) -10000 + (ID) 2400
Total energy: -127009.0 ( -147.17 by residue)
QMean score : 0.570
(partial model without unconserved sides chains):
PDB file :
Tito_2X2P.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2X2P-query.scw
PDB file :
Tito_Scwrl_2X2P.pdb
: