Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAGRSERLVITGAGGQLGSHLTAQAAREGRDM-LALTSSQW--DITDPAAAERIIRH--GDVVINCAAYTDVDGAESNEAVAYAVNATGPQHLARACARVGARLIHVSTDYVF--DGDFGGAEPRPYEPTDETAPQGVYARSKLAGEQAVLAAFPEAAVVRTAWVYTGGTGKDFVAVMRRLAAGHGRVDVVDDQTGSPTYVADLAEAL-----LALADAGVRGRVLHAANEGVVSRFGQARAVFEE-----CGADPQRVRPVSSAQFPRPAPRSSYSALSSRQWALAGLTPLRHWRSALATALAAPANSTSIDRRLPSTRD |
| 1KC1 Chain:A ((2-298)) | ------NILLFGKTGQVGWELQRSLAPVGNLIALDVHSKEFCGDFSNPKGVAETVRKLRPDVIVNAAAHTAVDKAESEPELAQLLNATSVEAIAKAANETGAWVVHYSTDYVFPGTGDI------PWQETDATSPLNVYGKTKLAGEKALQDNCPKHLIFRTSWVY-AGKGNNFAKTMLRLAKERQTLSVINDQYGAPTGAELLADCTAHAIRVALNKPEVAG-LYHLVAGGTTTWHDYAALVFDEARKAGITLALTELNAVPTSAYPTPASRPGNSRLNTEKFQRNFDLILPQWELGVKRMLTEMFTTTT---------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1KC1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -112739 for 2284 contacts (-49.4/contact) +
2D Compatibility (PS) -31593 + (NN) -20264 + (LL) 784
1D Compatibility (HY) -16800 + (ID) 4750
Total energy: -185362.0 ( -81.16 by residue)
QMean score : 0.487
|
|
|