Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMGTCPCESSERNEPVSRVSGTNEVSDGNETNNPAEVSDGNETNNPAEVSDGNETNNPAPVSRVSGTNEVSDGNETNNPAPVSRVSGTNEVSDGNETNNPAPVTEKPLHPHEPHIEILRGQPTDQELAALIAV--LGSISGSTPPAQPEPTRWGLPVDQLRYPVFSWQRITLQEMTHMRR
3VVM Chain:A ((78-133))----------------------------------------------------------------------------------------------------------------------GKPVDTDLWHVICVNSLGSCKGSTGPASTDP-RTGEPY-RLSFPELSIEDIA---------


General information:
TITO was launched using:
RESULT:

Template: 3VVM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 5314 for 221 contacts (24.0/contact) +
2D Compatibility (PS) -5237 + (NN) -6939 + (LL) 2440
1D Compatibility (HY) -3600 + (ID) 1100
Total energy: -9122.0 ( -41.28 by residue)
QMean score : 0.214

(partial model without unconserved sides chains):
PDB file : Tito_3VVM.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3VVM-query.scw
PDB file : Tito_Scwrl_3VVM.pdb: