Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMPLPADPSPTLSAYAHPERLVTADWLSAHMGAPGLAIVESDEDVLLYDVGHIPGAVKIDWHTDLNDPRVRDYINGEQFAELMDRKGIARDDTVVIYGDKSNWWAAYALWVFTLFGHADVRLLNGGRDLWLAERRETTLDVPTKTCTGYPVVQRNDAPIRAFRDDVLAILGAQPLIDVRSPEEYTGKRTHMPDYPEEGALRAGHIPTAVHIPWGKAADESGRFRSREELERLYDFINPDD--QTVVYCRIGERSSHTWFVLTHLLGKADVRNYDGSWTEWGNAVRVPIVAGEEPGVVPVV
3AAY Chain:A ((2-276))--------------ARCDVLVSADWAESNLHAPKVVFVEVDEDTSAYDRDHIAGAIKLDWRTDLQDPVKRDFVDAQQFSKLLSERGIANEDTVILYGGNNNWFAAYAYWYFKLYGHEKVKLLDGGRKKWELDGRPLSSDPVSRPVTSY-TASPPDNTIRAFRDEVLAAINVKNLIDVRSPDEFSGKILA-----QEQSQRPGHIPGAINVPWSRAANEDGTFKSDEELAKLYADAGLDNSKETIAYCRIGERSSHTWFVLRELLGHQNVKNYDGSWTEYGSLVGAPIELG---------


General information:
TITO was launched using:
RESULT:

Template: 3AAY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -133124 for 2242 contacts (-59.4/contact) +
2D Compatibility (PS) -29018 + (NN) -15184 + (LL) 628
1D Compatibility (HY) -20800 + (ID) 6750
Total energy: -204248.0 ( -91.10 by residue)
QMean score : 0.449

(partial model without unconserved sides chains):
PDB file : Tito_3AAY.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3AAY-query.scw
PDB file : Tito_Scwrl_3AAY.pdb: