Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTAAPTLQTIRLAPKALLHDHLDGGLRPATVLDIAGQVGYDDLPATDVDALASWFRTQSHSGSLERYLEPFSHTV-AVMQTPEALYRVAFECAQDLAADSVVYAEVRFAPEL------------HISCGLSFDDVVDTVLTGFAAGEKACAADGQPITVRCLVTAMRHA-AMSREIAELAIRFRDKGVVGFDIAGAEAGHPPTR---HLDAFEYMRDHNARFTIHAGEAFGLPSIHEAIAFCGADRLGHGVRIVDDIDVDADGGFQLGRLAAILRDKRIPLELCPSSNVQTGAVASIAEHPFDLLARARFRVTVNTDNRLMSDTSMSLEMHRLVEAFGYGWSDLARFTVNAMKSAFIPFDQRLAIIDEVIKPRFAALMGHSE |
| 1O5R Chain:A ((9-348)) | -------------PKVELHVHLDGAIKPETILYYGKRRGIA-LPADTPEELQNII-GMDKPLTLPDFLAKFDYYMPAIAGCRDAIKRIAYEFVEMKAKDGVVYVEVRYSPHLLANSKVEPIPWNQAEGDLTPDEVVSLVNQGLQEGERDFG-----VKVRSILCCMRHQPSWSSEVVELCKKYREQTVVAIDLAGDETIEGSSLFPGHVQAYAEAVKSGVHRTVHAGEVGSANVVKEAVDTLKTERLGHGYHTLEDT-----------TLYNRLRQENMHFEICPWSSYLTGAWKPDTEHAVIRFKNDQVNYSLNTDDPLIFKSTLDTDYQMTKKDMGFTEEEFKRLNINAAKSSFLPEDEKKELLDLLYK----------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1O5R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -215285 for 2794 contacts (-77.1/contact) +
2D Compatibility (PS) -34655 + (NN) -9203 + (LL) 2064
1D Compatibility (HY) -21200 + (ID) 5000
Total energy: -283279.0 ( -101.39 by residue)
QMean score : 0.376
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