Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSISASEARQRLFPLIEQVNTDHQPVRITSR-AGDAVLMSADDYDAWQETVYLLRSPENARRLMEAVARDKAGHSAFTKSVDELREMAGGEE
3G5O Chain:A ((14-94))
-----STIKGKLNEFVDAVSSTQDQITITKNGAPAAVLVGADEWESLQETLYWLAQPGIRESIAEADADIASGR---TYGEDEIRAEFG---
General information:
TITO was launched using:
RESULT:
Template:
3G5O.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -5760 for 369 contacts (-15.6/contact) +
2D Compatibility (PS) -8815 + (NN) -5001 + (LL) 784
1D Compatibility (HY) -4800 + (ID) 1300
Total energy: -24892.0 ( -67.46 by residue)
QMean score : 0.383
(partial model without unconserved sides chains):
PDB file :
Tito_3G5O.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3G5O-query.scw
PDB file :
Tito_Scwrl_3G5O.pdb
: