Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGGVLTLDAAFLGSVPADLGKALLERARADCGPVLHRAIES---MREPLATMAGYHLGWWNADRSTAAGSSGKYFRAALVYAAAAACGGDVGDATPVSAAVELVHNFTLLHDDV--MDGDATRRGRPTVWSVWGVGVAILLGDALHATAVRILTGLTDECVAVRAIRRL-----QMSCLDLCIGQFEDCLLEGQPEVTVDDYLRMAAGKTAALTGCCCALGALVANADDATIAALERFGHELGLAFQCVDDLIGIWGDPGVTGKPVGNDLARRKATLPVVAALNSRSEAATELAALYQAPAAMTASDVERATALVKVAGGGHVAQRCADERIQAAIAALPDAVRSPDLIALSQLICRREC |
| 3KRC Chain:A ((3-264)) | -----------------DFDGYMLRKAKS-----VNKALEAAVQMKEPLKI-------HESMRYSLLAG--GKRVRPMLCIAACELVGGDESTAMPAACAVEMIHTMSLMHDDLPCMDNDDLRRGKPTNHMAFGESVAVLAGDALLSFAFEHVAAATKGAPPERIVRVLGELAVSIGSEGLVAGQVVDVCSEGMAEVGLDHLEFIHHHKTAALLQGSVVLGAILGGGKEEEVAKLRKFANCIGLLFQVVDDILDVTK----------------KTTYPKLIGVEKSKEFADRL------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3KRC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -138221 for 1888 contacts (-73.2/contact) +
2D Compatibility (PS) -25569 + (NN) -14671 + (LL) 7120
1D Compatibility (HY) -14000 + (ID) 4250
Total energy: -189591.0 ( -100.42 by residue)
QMean score : 0.361
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