Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAKVNIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIPLDVAEGDTVIYSKYGGTEIKYNGEEYLILSARDVLAVVSK
3NX6 Chain:A ((2-94))
----SIKPLHDRVVVKPI-------------------STKGEVVAIGAGKPLDNGSLHAPV-VKVGDKVIYGQYAGSSYKSEGVEYKVLREDDILAVI--
General information:
TITO was launched using:
RESULT:
Template:
3NX6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -30913 for 498 contacts (-62.1/contact) +
2D Compatibility (PS) -7988 + (NN) -1391 + (LL) 1804
1D Compatibility (HY) -7200 + (ID) 1550
Total energy: -47238.0 ( -94.86 by residue)
QMean score : 0.704
(partial model without unconserved sides chains):
PDB file :
Tito_3NX6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3NX6-query.scw
PDB file :
Tito_Scwrl_3NX6.pdb
: