Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPDDQPAVPDVDRLARSMLLLHGDHHDHNDSPEQHRTCGSWSKSRDFADDPQRAAAVREASRAERDRYLTSGLQPVDCRFCHVTVTVKRLGPGHTAVQWNTEASRRCAYFTELRARGGDSARTRSCPRLTDSIEHAVAEGYLEHHDPNR |
5AMH Chain:A ((19-34)) | -----------------------------------------------------------------------GASIFRCRQCGQTISR-------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 5AMH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -4229 for 55 contacts (-76.9/contact) +
2D Compatibility (PS) -1543 + (NN) 1225 + (LL) 6408
1D Compatibility (HY) 0 + (ID) 250
Total energy: 1611.0 ( 29.29 by residue)
QMean score : 0.183
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