Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDRVAGQVNSRRGELLELAAAMFAERGLRATTVRDIADGAGILSGSLYHHFASKEEMVDELLRGFLDWLFARYRDIVDSTANPLERLQGLFMASFEAIEHHHAQ---VVIYQDEAQRLASQPRFSYIEDRNKQQRKMWVDVLNQGIEEGYFRPDLDVDLVYRFIRDTTWVSVRWYRPGGPLTAQQVGQQYLAIVLGGITKEGV
4MO7 Chain:A ((28-209))
--------ESARGKLLQTAAHLFRNKGFERTTVRDLASAVGIQSGSIFHHFKSKDEILRAVMEETIHYNTAMMRASLEEASTVRERVLALIRCELQSIMGGSGEAMAVLVYEWRSLSAEGQAHVLALRDVYEQ---IWLQVLGEAKAAGYIRG--DVFITRRFLTGALSWTTTWFRAQGSLTLEELAEEALLMVL--------
General information:
TITO was launched using:
RESULT:
Template:
4MO7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -95306 for 1268 contacts (-75.2/contact) +
2D Compatibility (PS) -19284 + (NN) -5945 + (LL) 1192
1D Compatibility (HY) -13600 + (ID) 2750
Total energy: -135693.0 ( -107.01 by residue)
QMean score : 0.470
(partial model without unconserved sides chains):
PDB file :
Tito_4MO7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4MO7-query.scw
PDB file :
Tito_Scwrl_4MO7.pdb
: